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Supplement · Grade A

Probiotics and medications.

Every documented pair, every citation. Below: 16 documented pairs grouped by mechanism.

Probiotics is in the Distil supplement database, evidence Grade A. The page below lists every medication we have explicitly assessed it against.

Probiotics support gut microbiome diversity, immune signalling and the gut-brain axis, but the headline rule is that the evidence is strain-specific. A product labelled only "multi-strain" without named strains tells you little. The strongest data sit with particular strains for particular jobs: Lactobacillus plantarum 299v for IBS, Saccharomyces boulardii for antibiotic-associated diarrhoea, and Lactobacillus rhamnosus GG for diarrhoea prevention, all Grade A in their niche, while general wellness claims are Grade B. Hungin 2013 and later meta-analyses back the IBS use, and Dinan 2013 covers the psychobiotic mood angle. Doses run from 10 to 50 billion CFU across at least five named species. The interactions are simple but important. Keep probiotics at least two hours apart from antibiotics, since taken together the antibiotic kills the live organisms. Prebiotic fibre such as inulin, FOS or psyllium feeds and sustains the colonisation. Some bloating on starting is normal and usually settles within a week or two.

Below are the 16 documented pairs we have explicitly assessed for Probiotics: 6 amber and 10 green. The pairs cluster around 2 mechanisms: Immunosuppression caution and Probiotic timing with antibiotics. Every call is cited to either a clinical reference (PMID) or the British National Formulary. Anything not listed here is either still to be assessed or beyond our database scope. The checker beneath surfaces assessments by medication, and the missing-item form at the bottom of the page routes any uncatalogued medication into our next curation pass.

Documented interactions

Immunosuppression caution

Amber Azathioprine

Probiotics are live bacteria or yeast, and for most people they are safe. But azathioprine dampens the immune system, often for an autoimmune condition or after a transplant, and in people whose defences are significantly weakened there have been rare cases of the probiotic organism getting into the bloodstream and causing an infection. If you take azathioprine, it is sensible to check with your specialist before starting a probiotic, and to avoid them if you are seriously unwell in hospital or have a central line or drip.

Amber Ciclosporin

Probiotics are live bacteria or yeast, and for most people they are safe. But ciclosporin strongly dampens the immune system, usually after a transplant or for a serious autoimmune condition, and in people whose defences are this weakened there have been rare cases of the probiotic organism getting into the bloodstream and causing an infection. If you take ciclosporin, check with your specialist team before starting a probiotic, and avoid them if you are seriously unwell in hospital or have a central line or drip.

Amber Everolimus

Probiotics are live bacteria or yeast, and for most people they are safe. But everolimus strongly dampens the immune system, used after a transplant or in some cancers, and in people whose defences are this weakened there have been rare cases of the probiotic organism getting into the bloodstream and causing an infection. If you take everolimus, check with your specialist team before starting a probiotic, and avoid them if you are seriously unwell in hospital or have a central line or drip.

Amber Methotrexate

Probiotics are live bacteria or yeast, and for most people they are safe. Methotrexate dampens the immune system, and in people whose defences are significantly weakened there have been rare cases of the probiotic organism getting into the bloodstream and causing an infection. At the usual low weekly doses for arthritis or psoriasis this risk is small, but it is sensible to check with your specialist before starting a probiotic, and to avoid them if you are seriously unwell in hospital or have a central line or drip.

Amber Sirolimus

Probiotics are live bacteria or yeast, and for most people they are safe. But sirolimus strongly dampens the immune system, usually after a transplant, and in people whose defences are this weakened there have been rare cases of the probiotic organism getting into the bloodstream and causing an infection. If you take sirolimus, check with your specialist team before starting a probiotic, and avoid them if you are seriously unwell in hospital or have a central line or drip.

Amber Tacrolimus

Probiotics are live bacteria or yeast, and for most people they are safe. But tacrolimus strongly dampens the immune system, usually after a transplant or for a serious autoimmune condition, and in people whose defences are this weakened there have been rare cases of the probiotic organism getting into the bloodstream and causing an infection. If you take tacrolimus, check with your specialist team before starting a probiotic, and avoid them if you are seriously unwell in hospital or have a central line or drip.

Probiotic timing with antibiotics

Green Amoxicillin

These are fine to use together, and probiotics may lower the chance of antibiotic-related diarrhoea. If you take a bacterial probiotic (most Lactobacillus or Bifidobacterium products), space it about two hours away from your amoxicillin dose so the antibiotic does not reduce the live bacteria. Saccharomyces boulardii is a yeast rather than a bacterium, so the antibiotic does not affect it and it can be taken at the same time. The main exception is if your immune system is seriously weakened or you are critically ill in hospital, when probiotics, particularly Saccharomyces boulardii, should be checked with your doctor first.

PMID 22570464 · PMID 20458757 · PMID 26756877 · BNF: Amoxicillin

These are fine to use together, and probiotics may lower the chance of antibiotic-related diarrhoea. If you take a bacterial probiotic (most Lactobacillus or Bifidobacterium products), space it about two hours away from your ciprofloxacin dose so the antibiotic does not reduce the live bacteria. Saccharomyces boulardii is a yeast rather than a bacterium, so the antibiotic does not affect it and it can be taken at the same time. The main exception is if your immune system is seriously weakened or you are critically ill in hospital, when probiotics, particularly Saccharomyces boulardii, should be checked with your doctor first.

PMID 22570464 · PMID 29257353 · PMID 20458757 · BNF: Ciprofloxacin

These are fine to use together, and probiotics may lower the chance of antibiotic-related diarrhoea. If you take a bacterial probiotic (most Lactobacillus or Bifidobacterium products), space it about two hours away from your clarithromycin dose so the antibiotic does not reduce the live bacteria. Saccharomyces boulardii is a yeast rather than a bacterium, so the antibiotic does not affect it and it can be taken at the same time. The main exception is if your immune system is seriously weakened or you are critically ill in hospital, when probiotics, particularly Saccharomyces boulardii, should be checked with your doctor first.

PMID 22570464 · PMID 29257353 · PMID 20458757 · BNF: Clarithromycin

These are fine to use together, and probiotics may lower the chance of antibiotic-related diarrhoea. If you take a bacterial probiotic (most Lactobacillus or Bifidobacterium products), space it about two hours away from your co-trimoxazole dose so the antibiotic does not reduce the live bacteria. Saccharomyces boulardii is a yeast rather than a bacterium, so the antibiotic does not affect it and it can be taken at the same time. The main exception is if your immune system is seriously weakened or you are critically ill in hospital, when probiotics, particularly Saccharomyces boulardii, should be checked with your doctor first.

PMID 22570464 · PMID 29257353 · PMID 20458757 · BNF: Co-trimoxazole
Green Doxycycline

These are fine to use together, and probiotics may lower the chance of antibiotic-related diarrhoea. If you take a bacterial probiotic (most Lactobacillus or Bifidobacterium products), space it about two hours away from your doxycycline dose so the antibiotic does not reduce the live bacteria. Saccharomyces boulardii is a yeast rather than a bacterium, so the antibiotic does not affect it and it can be taken at the same time. The main exception is if your immune system is seriously weakened or you are critically ill in hospital, when probiotics, particularly Saccharomyces boulardii, should be checked with your doctor first.

PMID 22570464 · PMID 20458757 · PMID 26756877 · BNF: Doxycycline
Green Erythromycin

These are fine to use together, and probiotics may lower the chance of antibiotic-related diarrhoea. If you take a bacterial probiotic (most Lactobacillus or Bifidobacterium products), space it about two hours away from your erythromycin dose so the antibiotic does not reduce the live bacteria. Saccharomyces boulardii is a yeast rather than a bacterium, so the antibiotic does not affect it and it can be taken at the same time. The main exception is if your immune system is seriously weakened or you are critically ill in hospital, when probiotics, particularly Saccharomyces boulardii, should be checked with your doctor first.

PMID 22570464 · PMID 20458757 · PMID 26756877 · BNF: Erythromycin

These are fine to use together, and probiotics may lower the chance of antibiotic-related diarrhoea. If you take a bacterial probiotic (most Lactobacillus or Bifidobacterium products), space it about two hours away from your metronidazole dose so the antibiotic does not reduce the live bacteria. Saccharomyces boulardii is a yeast rather than a bacterium, so the antibiotic does not affect it and it can be taken at the same time. The main exception is if your immune system is seriously weakened or you are critically ill in hospital, when probiotics, particularly Saccharomyces boulardii, should be checked with your doctor first.

PMID 22570464 · PMID 20458757 · PMID 26756877 · BNF: Metronidazole
Green Minocycline

These are fine to use together, and probiotics may lower the chance of antibiotic-related diarrhoea. If you take a bacterial probiotic (most Lactobacillus or Bifidobacterium products), space it about two hours away from your minocycline dose so the antibiotic does not reduce the live bacteria. Saccharomyces boulardii is a yeast rather than a bacterium, so the antibiotic does not affect it and it can be taken at the same time. The main exception is if your immune system is seriously weakened or you are critically ill in hospital, when probiotics should be checked with your doctor first.

PMID 22570464 · PMID 20458757 · PMID 26756877 · BNF: Minocycline

These are fine to use together, and probiotics may lower the chance of antibiotic-related diarrhoea. If you take a bacterial probiotic (most Lactobacillus or Bifidobacterium products), space it about two hours away from your nitrofurantoin dose so the antibiotic does not reduce the live bacteria. Saccharomyces boulardii is a yeast rather than a bacterium, so the antibiotic does not affect it and it can be taken at the same time. The main exception is if your immune system is seriously weakened or you are critically ill in hospital, when probiotics, particularly Saccharomyces boulardii, should be checked with your doctor first.

PMID 22570464 · PMID 20458757 · PMID 26756877 · BNF: Nitrofurantoin
Green Trimethoprim

These are fine to use together, and probiotics may lower the chance of antibiotic-related diarrhoea. If you take a bacterial probiotic (most Lactobacillus or Bifidobacterium products), space it about two hours away from your trimethoprim dose so the antibiotic does not reduce the live bacteria. Saccharomyces boulardii is a yeast rather than a bacterium, so the antibiotic does not affect it and it can be taken at the same time. The main exception is if your immune system is seriously weakened or you are critically ill in hospital, when probiotics, particularly Saccharomyces boulardii, should be checked with your doctor first.

PMID 22570464 · PMID 20458757 · PMID 26756877 · BNF: Trimethoprim

What this list does not say. Pairs not flagged here are not implicitly safe. They are either not yet in our database, or fall outside our inclusion scope. Use the checker below to surface any medication, and submit a missing item if you take something we have not catalogued.

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For adults over 18. This tool gives evidence-graded information, not medical advice. Always discuss changes with your GP, especially if you take any medication, are pregnant, breastfeeding, or have a serious health condition.
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How we decide

How we grade severity, choose what's in scope, and what we exclude.

Every call on this page is reasoned. We publish the full rubric for severity tiers, the medication inclusion logic, the evidence grades we accept, and what we deliberately leave out. About three thousand words. Worth reading once if you use this tool more than occasionally.

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Distil's interactions database is reviewed and updated every quarter. We grade evidence transparently and publish our methodology, including every database change, at /about/methodology. This tool is information, not a substitute for clinical judgement. If you take medication and supplements together, your GP or pharmacist can review your full regimen against your medical history. If you want a full personalised stack reasoned against this same database, the Distil report is the next step up.